Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-4A0A075B6C1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-4A0A075B6C1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Mir5122-201ENSMUST00000175004 89 ntBASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-4A0A075B6C1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Gm18101-201ENSMUST00000215769 548 ntBASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Grk6-207ENSMUST00000225925 2769 ntBASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-4A0A075B6C1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-4A0A075B6C1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-4A0A075B6C1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms