Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Gm9385-201ENSMUST00000117563 472 ntBASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gm15427-201ENSMUST00000117288 531 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Gm2213-201ENSMUST00000197485 688 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-4A0A075B6B4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms