Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm12008-201ENSMUST00000117791 755 ntBASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm27525-201ENSMUST00000184465 107 ntBASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm37935-201ENSMUST00000192012 982 ntBASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6d-7A0A075B6B0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm14140-201ENSMUST00000119999 995 ntBASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm15467-201ENSMUST00000120582 445 ntBASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms