Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gm7213-201ENSMUST00000215977 950 ntBASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav8-1A0A075B641 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Mir5122-201ENSMUST00000175004 89 ntBASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms