Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9-1A0A075B601 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Gm7862-201ENSMUST00000121461 292 ntBASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Gm18246-201ENSMUST00000221023 728 ntBASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9-1A0A075B601 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Gm7153-201ENSMUST00000117092 455 ntBASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Gm4899-201ENSMUST00000178708 719 ntBASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9-1A0A075B601 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms