Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb3S4R1G7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.26□□□□□ -0.29
H2afb3S4R1G7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Gm34391-201ENSMUST00000203706 907 ntBASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb3S4R1G7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Gm7230-201ENSMUST00000173026 815 ntBASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Gm5682-201ENSMUST00000173402 505 ntBASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.25□□□□□ -0.29
H2afb3S4R1G7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms