Protein–RNA interactions for Protein: Q9Z2D7

Mbd4, Methyl-CpG-binding domain protein 4, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd4Q9Z2D7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gm13453-201ENSMUST00000118708 357 ntBASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gm13464-201ENSMUST00000119418 935 ntBASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gm27321-201ENSMUST00000185021 205 ntBASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gm29541-201ENSMUST00000191351 678 ntBASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gm45098-201ENSMUST00000207179 657 ntBASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Mbd4Q9Z2D7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Gm13223-201ENSMUST00000118609 747 ntBASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Gm18766-201ENSMUST00000189811 808 ntBASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Gm6888-201ENSMUST00000221983 706 ntBASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd4Q9Z2D7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Mbd4Q9Z2D7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mbd4Q9Z2D7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.23□□□□□ -0.13
Mbd4Q9Z2D7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms