Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Gm44492-201ENSMUST00000197012 141 ntBASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.13■□□□□ 0.33
Cdc45Q9Z1X9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Gm8749-201ENSMUST00000117737 331 ntBASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Gm5264-201ENSMUST00000190584 848 ntBASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdc45Q9Z1X9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Gm15427-201ENSMUST00000117288 531 ntBASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Gm9385-201ENSMUST00000117563 472 ntBASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Gm8000-201ENSMUST00000188378 592 ntBASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdc45Q9Z1X9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Rpph1-201ENSMUST00000175096 319 ntBASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdc45Q9Z1X9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms