Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne6Q9Z140 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne6Q9Z140 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.33□□□□□ -0.11
Cpne6Q9Z140 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cpne6Q9Z140 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Cpne6Q9Z140 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne6Q9Z140 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne6Q9Z140 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Gm11543-201ENSMUST00000120758 370 ntBASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Gm16026-204ENSMUST00000162652 683 ntBASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Mir7023-201ENSMUST00000185093 64 ntBASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne6Q9Z140 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Sybu-209ENSMUST00000228639 4113 ntBASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne6Q9Z140 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne6Q9Z140 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms