Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Gm10175-201ENSMUST00000086013 645 ntBASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmg20bQ9Z104 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20bQ9Z104 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Gm6443-201ENSMUST00000203599 874 ntBASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.33■□□□□ 0.36
Hmg20bQ9Z104 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Gm5479-201ENSMUST00000160578 435 ntBASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Gm45098-201ENSMUST00000207179 657 ntBASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20bQ9Z104 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Gm14042-201ENSMUST00000120139 833 ntBASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Gm15483-201ENSMUST00000120338 456 ntBASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Gm17271-201ENSMUST00000165535 355 ntBASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Gm27525-201ENSMUST00000184465 107 ntBASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms