Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm13464-201ENSMUST00000119418 935 ntBASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm9726-201ENSMUST00000180321 678 ntBASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn9Q9Z0S7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Gm16026-204ENSMUST00000162652 683 ntBASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Thap2-203ENSMUST00000218989 527 ntBASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn9Q9Z0S7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Cldn9Q9Z0S7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Gm16198-201ENSMUST00000118766 670 ntBASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Gm5177-201ENSMUST00000183092 997 ntBASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn9Q9Z0S7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms