Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.47□□□□□ -0.57
CcsQ9WU84 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.47□□□□□ -0.57
CcsQ9WU84 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.47□□□□□ -0.57
CcsQ9WU84 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.47□□□□□ -0.57
CcsQ9WU84 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.46□□□□□ -0.57
CcsQ9WU84 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Rprl3-201ENSMUST00000157400 290 ntBASIC11.46□□□□□ -0.57
CcsQ9WU84 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.46□□□□□ -0.57
CcsQ9WU84 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.46□□□□□ -0.57
CcsQ9WU84 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.46□□□□□ -0.57
CcsQ9WU84 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcsQ9WU84 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CcsQ9WU84 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CcsQ9WU84 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.46□□□□□ -0.58
CcsQ9WU84 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CcsQ9WU84 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CcsQ9WU84 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcsQ9WU84 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms