Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trex2Q9R1A9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Efs-202ENSMUST00000227037 2540 ntBASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Gm15590-201ENSMUST00000078419 552 ntBASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.43□□□□□ -0.42
Trex2Q9R1A9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.43□□□□□ -0.42
Trex2Q9R1A9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trex2Q9R1A9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Gm13036-201ENSMUST00000117799 748 ntBASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.41□□□□□ -0.42
Trex2Q9R1A9 Gm10499-201ENSMUST00000174094 934 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms