Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm14659-201ENSMUST00000117667 843 ntBASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm14719-201ENSMUST00000121891 340 ntBASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm44548-201ENSMUST00000208929 192 ntBASIC13.01□□□□□ -0.33
Nubp1Q9R060 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.01□□□□□ -0.33
Nubp1Q9R060 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.01□□□□□ -0.33
Nubp1Q9R060 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp1Q9R060 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Gm19430-201ENSMUST00000193847 2137 ntBASIC13□□□□□ -0.33
Nubp1Q9R060 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Nubp1Q9R060 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Gm3365-201ENSMUST00000216296 1480 ntBASIC13□□□□□ -0.33
Nubp1Q9R060 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
Nubp1Q9R060 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Gm37748-201ENSMUST00000194379 1140 ntBASIC13□□□□□ -0.33
Nubp1Q9R060 Gm18049-201ENSMUST00000208909 581 ntBASIC13□□□□□ -0.33
Nubp1Q9R060 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13□□□□□ -0.33
Nubp1Q9R060 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13□□□□□ -0.33
Nubp1Q9R060 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13□□□□□ -0.33
Nubp1Q9R060 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nubp1Q9R060 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp1Q9R060 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.99□□□□□ -0.33
Nubp1Q9R060 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Syt7-205ENSMUST00000224135 1557 ntBASIC12.99□□□□□ -0.33
Nubp1Q9R060 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.99□□□□□ -0.33
Nubp1Q9R060 Ighv10-4-201ENSMUST00000193702 299 ntBASIC12.99□□□□□ -0.33
Nubp1Q9R060 Gm20239-201ENSMUST00000196610 982 ntBASIC12.99□□□□□ -0.33
Nubp1Q9R060 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms