Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.21■□□□□ 0.03
Msh5Q9QUM7 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Gm7461-201ENSMUST00000058918 827 ntBASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh5Q9QUM7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Msh5Q9QUM7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh5Q9QUM7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Msh5Q9QUM7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh5Q9QUM7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh5Q9QUM7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Gm15173-201ENSMUST00000122049 433 ntBASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Celf4-206ENSMUST00000224553 1729 ntBASIC15.2■□□□□ 0.02
Msh5Q9QUM7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh5Q9QUM7 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.19■□□□□ 0.02
Msh5Q9QUM7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Msh5Q9QUM7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Gm12134-201ENSMUST00000122109 520 ntBASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 AC165260.5-201ENSMUST00000224640 1247 ntBASIC15.18■□□□□ 0.02
Msh5Q9QUM7 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Msh5Q9QUM7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms