Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Gm29707-201ENSMUST00000196325 491 ntBASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem1Q9JKE2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Gm13168-201ENSMUST00000121771 632 ntBASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trem1Q9JKE2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Trem1Q9JKE2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.21□□□□□ -0.3
Trem1Q9JKE2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trem1Q9JKE2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trem1Q9JKE2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trem1Q9JKE2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.21□□□□□ -0.3
Trem1Q9JKE2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem1Q9JKE2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem1Q9JKE2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem1Q9JKE2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem1Q9JKE2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms