Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cacna1fQ9JIS7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1fQ9JIS7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1fQ9JIS7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Gm5035-201ENSMUST00000215581 927 ntBASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1fQ9JIS7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms