Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrp8Q9DB85 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 App-207ENSMUST00000227737 2827 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm3436-201ENSMUST00000179930 840 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm29310-201ENSMUST00000185468 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21825-201ENSMUST00000185728 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm29109-201ENSMUST00000185895 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21896-201ENSMUST00000186520 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21873-201ENSMUST00000186728 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21794-201ENSMUST00000187056 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21880-201ENSMUST00000187275 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21826-201ENSMUST00000187451 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21198-201ENSMUST00000188393 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21749-201ENSMUST00000189343 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21901-201ENSMUST00000189568 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm29424-201ENSMUST00000189716 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm28599-201ENSMUST00000189838 694 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21867-201ENSMUST00000189917 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm29269-201ENSMUST00000190087 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21722-201ENSMUST00000190153 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm28423-201ENSMUST00000190701 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21899-201ENSMUST00000190745 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21910-201ENSMUST00000191163 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21849-201ENSMUST00000191571 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm28678-201ENSMUST00000191593 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm20910-201ENSMUST00000193268 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm21871-201ENSMUST00000194621 696 ntBASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp8Q9DB85 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms