Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Gm5364-201ENSMUST00000216789 889 ntBASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Gm9182-201ENSMUST00000217829 639 ntBASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp4bQ9D8B3 Carlr-201ENSMUST00000181515 2574 ntBASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp4bQ9D8B3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp4bQ9D8B3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms