Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Mir8098-201ENSMUST00000184011 137 ntBASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp4cQ9D7F7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Gm15590-201ENSMUST00000078419 552 ntBASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp4cQ9D7F7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Acot6-202ENSMUST00000222921 3622 ntBASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Gm10060-201ENSMUST00000212002 111 ntBASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp4cQ9D7F7 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Mir5131-201ENSMUST00000175426 93 ntBASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Gm18246-201ENSMUST00000221023 728 ntBASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4cQ9D7F7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms