Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Gm18101-201ENSMUST00000215769 548 ntBASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a3Q9D554 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm8825-201ENSMUST00000182565 998 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm4518-201ENSMUST00000182638 718 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm21559-201ENSMUST00000220638 855 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm8587-201ENSMUST00000076538 843 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Grk6-205ENSMUST00000224653 2976 ntBASIC14.94□□□□□ -0.02
Sf3a3Q9D554 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm27389-201ENSMUST00000183622 195 ntBASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.93□□□□□ -0.02
Sf3a3Q9D554 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms