Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc7Q9D541 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc7Q9D541 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc7Q9D541 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc7Q9D541 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc7Q9D541 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc7Q9D541 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Gm14042-201ENSMUST00000120139 833 ntBASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc7Q9D541 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Gm5177-201ENSMUST00000183092 997 ntBASIC17.19■□□□□ 0.34
Ccdc7Q9D541 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc7Q9D541 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc7Q9D541 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc7Q9D541 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc7Q9D541 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc7Q9D541 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc7Q9D541 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc7Q9D541 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc7Q9D541 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms