Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf135Q9CWS1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Rnf135Q9CWS1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Gm11764-201ENSMUST00000120221 623 ntBASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf135Q9CWS1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Gm12008-201ENSMUST00000117791 755 ntBASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Gm4899-201ENSMUST00000178708 719 ntBASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Gm7787-201ENSMUST00000216858 688 ntBASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms