Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.33■□□□□ 0.36
Smc3Q9CW03 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc3Q9CW03 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smc3Q9CW03 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Gm7862-201ENSMUST00000121461 292 ntBASIC17.31■□□□□ 0.36
Smc3Q9CW03 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Gm4899-201ENSMUST00000178708 719 ntBASIC17.31■□□□□ 0.36
Smc3Q9CW03 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smc3Q9CW03 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.3■□□□□ 0.36
Smc3Q9CW03 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms