Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Gm5417-201ENSMUST00000079706 384 ntBASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTRAFQ9CQE8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Gm10653-202ENSMUST00000139570 835 ntBASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RTRAFQ9CQE8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Mir5130-201ENSMUST00000175160 84 ntBASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Gm27389-201ENSMUST00000183622 195 ntBASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Gm8520-201ENSMUST00000186517 868 ntBASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RTRAFQ9CQE8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms