Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trim11Q99PQ2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Gm13597-201ENSMUST00000121239 375 ntBASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim11Q99PQ2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim11Q99PQ2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim11Q99PQ2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Gm8749-201ENSMUST00000117737 331 ntBASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Gm13464-201ENSMUST00000119418 935 ntBASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms