Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim34aQ99PP6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Gm9229-201ENSMUST00000222777 126 ntBASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim34aQ99PP6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.08■□□□□ 0.49
Trim34aQ99PP6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Gm28631-201ENSMUST00000190740 334 ntBASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim34aQ99PP6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Gm14928-201ENSMUST00000120198 477 ntBASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Gm12490-201ENSMUST00000120255 560 ntBASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim34aQ99PP6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms