Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Gm27389-201ENSMUST00000183622 195 ntBASIC12.56□□□□□ -0.4
Smim3Q99PE5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim3Q99PE5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.55□□□□□ -0.4
Smim3Q99PE5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm20760-201ENSMUST00000179197 648 ntBASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm18101-201ENSMUST00000215769 548 ntBASIC12.55□□□□□ -0.4
Smim3Q99PE5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim3Q99PE5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim3Q99PE5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.54□□□□□ -0.4
Smim3Q99PE5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.54□□□□□ -0.4
Smim3Q99PE5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.54□□□□□ -0.4
Smim3Q99PE5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.54□□□□□ -0.4
Smim3Q99PE5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms