Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Ighv10-4-201ENSMUST00000193702 299 ntBASIC18.94■□□□□ 0.62
Rtn4Q99P72 AC140209.1-201ENSMUST00000227875 284 ntBASIC18.94■□□□□ 0.62
Rtn4Q99P72 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.94■□□□□ 0.62
Rtn4Q99P72 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtn4Q99P72 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rtn4Q99P72 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.92■□□□□ 0.62
Rtn4Q99P72 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Gm24541-201ENSMUST00000103871 96 ntBASIC18.92■□□□□ 0.62
Rtn4Q99P72 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.92■□□□□ 0.62
Rtn4Q99P72 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtn4Q99P72 App-207ENSMUST00000227737 2827 ntBASIC18.92■□□□□ 0.62
Rtn4Q99P72 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Gm43868-201ENSMUST00000205187 2114 ntBASIC18.91■□□□□ 0.62
Rtn4Q99P72 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Gm8318-201ENSMUST00000182954 872 ntBASIC18.91■□□□□ 0.62
Rtn4Q99P72 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.91■□□□□ 0.62
Rtn4Q99P72 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn4Q99P72 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms