Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1b1Q99LU0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1b1Q99LU0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gm12350-201ENSMUST00000121208 462 ntBASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gm4899-201ENSMUST00000178708 719 ntBASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chmp1b1Q99LU0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms