Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Gm6550-201ENSMUST00000187574 993 ntBASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Gm45167-201ENSMUST00000208007 322 ntBASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Gm18246-201ENSMUST00000221023 728 ntBASIC15.27■□□□□ 0.04
Cdk5rap3Q99LM2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk5rap3Q99LM2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Gm9103-201ENSMUST00000119371 405 ntBASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk5rap3Q99LM2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk5rap3Q99LM2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Gm24589-201ENSMUST00000116692 94 ntBASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms