Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.92■□□□□ 0.3
Rfc4Q99J62 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 BC037039-201ENSMUST00000192003 2205 ntBASIC16.92■□□□□ 0.3
Rfc4Q99J62 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm6222-201ENSMUST00000120787 396 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm29310-201ENSMUST00000185468 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21825-201ENSMUST00000185728 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm29109-201ENSMUST00000185895 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21896-201ENSMUST00000186520 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21873-201ENSMUST00000186728 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21794-201ENSMUST00000187056 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21880-201ENSMUST00000187275 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21826-201ENSMUST00000187451 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21198-201ENSMUST00000188393 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21749-201ENSMUST00000189343 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21901-201ENSMUST00000189568 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm29424-201ENSMUST00000189716 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm28599-201ENSMUST00000189838 694 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21867-201ENSMUST00000189917 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm29269-201ENSMUST00000190087 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21722-201ENSMUST00000190153 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm28423-201ENSMUST00000190701 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21899-201ENSMUST00000190745 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21910-201ENSMUST00000191163 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21849-201ENSMUST00000191571 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm28678-201ENSMUST00000191593 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm20910-201ENSMUST00000193268 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm21871-201ENSMUST00000194621 696 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Dupd1-202ENSMUST00000224735 548 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Gm6180-201ENSMUST00000065243 498 ntBASIC16.91■□□□□ 0.3
Rfc4Q99J62 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfc4Q99J62 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfc4Q99J62 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Gm11478-201ENSMUST00000117851 599 ntBASIC16.9■□□□□ 0.3
Rfc4Q99J62 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfc4Q99J62 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Rfc4Q99J62 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfc4Q99J62 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfc4Q99J62 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rfc4Q99J62 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfc4Q99J62 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfc4Q99J62 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.89■□□□□ 0.3
Rfc4Q99J62 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms