Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Gm6736-201ENSMUST00000166583 948 ntBASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Gm45098-201ENSMUST00000207179 657 ntBASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b5Q923D4 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Gm11745-201ENSMUST00000121669 448 ntBASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b5Q923D4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Gm2810-201ENSMUST00000118681 990 ntBASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Gm14822-201ENSMUST00000122247 291 ntBASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b5Q923D4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms