Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.02□□□□□ -0.33
Chmp1aQ921W0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Chmp1aQ921W0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Gm25016-201ENSMUST00000158399 131 ntBASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Gm29518-201ENSMUST00000190858 372 ntBASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Chmp1aQ921W0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Gm4459-201ENSMUST00000118750 468 ntBASIC13□□□□□ -0.33
Chmp1aQ921W0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Gm12497-201ENSMUST00000138778 237 ntBASIC13□□□□□ -0.33
Chmp1aQ921W0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chmp1aQ921W0 AC122024.2-201ENSMUST00000220086 871 ntBASIC13□□□□□ -0.33
Chmp1aQ921W0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chmp1aQ921W0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1aQ921W0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Chmp1aQ921W0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1aQ921W0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1aQ921W0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms