Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.02■□□□□ 0.32
Smc1bQ920F6 Gm2272-201ENSMUST00000194903 582 ntBASIC17.02■□□□□ 0.32
Smc1bQ920F6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc1bQ920F6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smc1bQ920F6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Smc1bQ920F6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc1bQ920F6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc1bQ920F6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc1bQ920F6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Smc1bQ920F6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc1bQ920F6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Gm27618-201ENSMUST00000183671 60 ntBASIC17.01■□□□□ 0.31
Smc1bQ920F6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.01■□□□□ 0.31
Smc1bQ920F6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.01■□□□□ 0.31
Smc1bQ920F6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc1bQ920F6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smc1bQ920F6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17■□□□□ 0.31
Smc1bQ920F6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smc1bQ920F6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smc1bQ920F6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Smc1bQ920F6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Smc1bQ920F6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Smc1bQ920F6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1bQ920F6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Gm27989-201ENSMUST00000184721 107 ntBASIC16.99■□□□□ 0.31
Smc1bQ920F6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.99■□□□□ 0.31
Smc1bQ920F6 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.99■□□□□ 0.31
Smc1bQ920F6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1bQ920F6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms