Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Gm24158-201ENSMUST00000175263 71 ntBASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdha11Q91Y19 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Gm25287-201ENSMUST00000103846 110 ntBASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Gm22918-201ENSMUST00000103855 110 ntBASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.47■□□□□ 0.07
Pcdha11Q91Y19 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm22065-201ENSMUST00000103753 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm22066-201ENSMUST00000103761 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24932-201ENSMUST00000103763 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24115-201ENSMUST00000103799 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm22190-201ENSMUST00000103827 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm22191-201ENSMUST00000103831 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24721-201ENSMUST00000103849 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm28018-201ENSMUST00000103869 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm26399-201ENSMUST00000103937 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm25349-201ENSMUST00000177728 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm23616-201ENSMUST00000177797 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm25871-201ENSMUST00000177816 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24752-201ENSMUST00000178240 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24496-201ENSMUST00000178287 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm25649-201ENSMUST00000178476 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm25548-201ENSMUST00000178681 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm23147-201ENSMUST00000178841 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm26095-201ENSMUST00000179270 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm22171-201ENSMUST00000179283 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm23936-201ENSMUST00000179354 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm22619-201ENSMUST00000179516 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm25255-201ENSMUST00000179579 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24755-201ENSMUST00000179691 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm26506-201ENSMUST00000179692 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm25086-201ENSMUST00000179931 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm23243-201ENSMUST00000180047 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24659-201ENSMUST00000180212 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm24169-201ENSMUST00000180244 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm23689-201ENSMUST00000180354 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm27359-201ENSMUST00000184153 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm27785-201ENSMUST00000184268 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm27466-201ENSMUST00000184396 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm27703-201ENSMUST00000184836 110 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm7774-201ENSMUST00000200064 533 ntBASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha11Q91Y19 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms