Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Gm27702-201ENSMUST00000184512 56 ntBASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Sybu-209ENSMUST00000228639 4113 ntBASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Gm25911-201ENSMUST00000157621 56 ntBASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha3Q91Y16 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Gm14822-201ENSMUST00000122247 291 ntBASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Gm23547-201ENSMUST00000158210 271 ntBASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha3Q91Y16 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Gm4995-201ENSMUST00000117247 432 ntBASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Gm16198-201ENSMUST00000118766 670 ntBASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms