Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Gm6218-201ENSMUST00000219812 628 ntBASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Asic1-205ENSMUST00000228185 1818 ntBASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb5Q91XZ5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb5Q91XZ5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Gm3436-201ENSMUST00000179930 840 ntBASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb5Q91XZ5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb5Q91XZ5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb5Q91XZ5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhb5Q91XZ5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb5Q91XZ5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms