Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb6Q91XZ4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Gm20553-201ENSMUST00000204205 844 ntBASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Gm10175-201ENSMUST00000086013 645 ntBASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb6Q91XZ4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm14494-201ENSMUST00000118786 435 ntBASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm15467-201ENSMUST00000120582 445 ntBASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb6Q91XZ4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb6Q91XZ4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms