Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Gm1401-201ENSMUST00000122048 772 ntBASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Gm45167-201ENSMUST00000208007 322 ntBASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga11Q91XY8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Pcdhga11Q91XY8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms