Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Gm38225-201ENSMUST00000194001 393 ntBASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga6Q91XY2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Gm16215-201ENSMUST00000161990 637 ntBASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga6Q91XY2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Gm14767-201ENSMUST00000121559 586 ntBASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Gm38294-201ENSMUST00000192831 381 ntBASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Gm44855-201ENSMUST00000205725 362 ntBASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhga6Q91XY2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga6Q91XY2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga6Q91XY2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga6Q91XY2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga6Q91XY2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga6Q91XY2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga6Q91XY2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms