Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trex1Q91XB0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.82■□□□□ 0.28
Trex1Q91XB0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.81■□□□□ 0.28
Trex1Q91XB0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Gm3436-201ENSMUST00000179930 840 ntBASIC16.81■□□□□ 0.28
Trex1Q91XB0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trex1Q91XB0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trex1Q91XB0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.79■□□□□ 0.28
Trex1Q91XB0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms