Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gm13829-201ENSMUST00000119600 138 ntBASIC14.55□□□□□ -0.08
Vsx1Q91V10 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.55□□□□□ -0.08
Vsx1Q91V10 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.55□□□□□ -0.08
Vsx1Q91V10 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.54□□□□□ -0.08
Vsx1Q91V10 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Shd-206ENSMUST00000225145 998 ntBASIC14.54□□□□□ -0.08
Vsx1Q91V10 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.54□□□□□ -0.08
Vsx1Q91V10 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.54□□□□□ -0.08
Vsx1Q91V10 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vsx1Q91V10 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.54□□□□□ -0.08
Vsx1Q91V10 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vsx1Q91V10 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.53□□□□□ -0.08
Vsx1Q91V10 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Mir1938-201ENSMUST00000158746 100 ntBASIC14.53□□□□□ -0.08
Vsx1Q91V10 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Gm18018-201ENSMUST00000198273 408 ntBASIC14.53□□□□□ -0.08
Vsx1Q91V10 Gm43630-201ENSMUST00000201550 776 ntBASIC14.53□□□□□ -0.08
Vsx1Q91V10 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vsx1Q91V10 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms