Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tram1Q91V04 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tram1Q91V04 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tram1Q91V04 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tram1Q91V04 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tram1Q91V04 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.68□□□□□ -0.38
Tram1Q91V04 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.68□□□□□ -0.38
Tram1Q91V04 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tram1Q91V04 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.68□□□□□ -0.38
Tram1Q91V04 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.68□□□□□ -0.38
Tram1Q91V04 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tram1Q91V04 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Gm44454-201ENSMUST00000198541 138 ntBASIC12.68□□□□□ -0.38
Tram1Q91V04 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Tram1Q91V04 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.68□□□□□ -0.38
Tram1Q91V04 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.68□□□□□ -0.38
Tram1Q91V04 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Tram1Q91V04 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tram1Q91V04 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.67□□□□□ -0.38
Tram1Q91V04 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.67□□□□□ -0.38
Tram1Q91V04 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tram1Q91V04 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tram1Q91V04 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Gm15358-201ENSMUST00000119249 520 ntBASIC12.66□□□□□ -0.38
Tram1Q91V04 Gm12497-201ENSMUST00000138778 237 ntBASIC12.66□□□□□ -0.38
Tram1Q91V04 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Tram1Q91V04 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms