Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.24■□□□□ 0.03
Trim60Q8VI40 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.24■□□□□ 0.03
Trim60Q8VI40 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.24■□□□□ 0.03
Trim60Q8VI40 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.24■□□□□ 0.03
Trim60Q8VI40 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim60Q8VI40 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Gm6550-201ENSMUST00000187574 993 ntBASIC15.23■□□□□ 0.03
Trim60Q8VI40 Gm18246-201ENSMUST00000221023 728 ntBASIC15.23■□□□□ 0.03
Trim60Q8VI40 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.23■□□□□ 0.03
Trim60Q8VI40 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim60Q8VI40 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim60Q8VI40 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms