Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpa1Q8VEE4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Mir3081-201ENSMUST00000175305 84 ntBASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpa1Q8VEE4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Gm29518-201ENSMUST00000190858 372 ntBASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Gm17808-201ENSMUST00000200859 894 ntBASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms