Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mir449b-201ENSMUST00000104833 80 ntBASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Ndc1Q8VCB1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ndc1Q8VCB1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ndc1Q8VCB1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Gm7774-201ENSMUST00000200064 533 ntBASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndc1Q8VCB1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 AA543401-201ENSMUST00000164248 1269 ntBASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndc1Q8VCB1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Gm22065-201ENSMUST00000103753 110 ntBASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Gm22066-201ENSMUST00000103761 110 ntBASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Gm24932-201ENSMUST00000103763 110 ntBASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Gm24115-201ENSMUST00000103799 110 ntBASIC13.87□□□□□ -0.19
Ndc1Q8VCB1 Gm22190-201ENSMUST00000103827 110 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms