Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Mir3113-201ENSMUST00000175478 76 ntBASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm27525-201ENSMUST00000184465 107 ntBASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm2451-201ENSMUST00000199447 999 ntBASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm10290-201ENSMUST00000200451 999 ntBASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Top1mtQ8R4U6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Top1mtQ8R4U6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Top1mtQ8R4U6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms