Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx54Q8K4L0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx54Q8K4L0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Gm11814-201ENSMUST00000119515 929 ntBASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 AC153872.1-201ENSMUST00000199539 128 ntBASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Gm9182-201ENSMUST00000217829 639 ntBASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx54Q8K4L0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Gm27243-201ENSMUST00000183964 521 ntBASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx54Q8K4L0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Gm2495-201ENSMUST00000191160 466 ntBASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx54Q8K4L0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms