Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Mir5126-201ENSMUST00000175513 77 ntBASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm27300-201ENSMUST00000184085 97 ntBASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm27335-201ENSMUST00000184758 97 ntBASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.42■□□□□ 0.38
Cchcr1Q8K2I2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cchcr1Q8K2I2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Gm13464-201ENSMUST00000119418 935 ntBASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Gm9726-201ENSMUST00000180321 678 ntBASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cchcr1Q8K2I2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cchcr1Q8K2I2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms